Thanks for a quick reply. Showing as unavailable on sites I look at?. I live in uk. Hi, did you get anywhere with this? I also live in the Uk and desperately want to get the PED basic card reader, but all out of stock.
Will any brand memory card work with the Ped-Basic card reader? The card has been damaged and I want to purchase another however Amazon shows out of stock. Thank you. Save my name, email, and website in this browser for the next time I comment. Notify me of replies via e-mail. Or you want to organize your designs on memory cards. Realistic stitch design preview — The stitching and colors are displayed on your computer screen so that you can preview the actual embroidery.
Writes the embroidery design data. For use with all Brother home embroidery machines with a memory card slot. Note: This product cannot be used to create embroidery data or designs. Download File Analyzer here. Update info Upload example file. Various viewers for this file format These apps are known to open certain types of PED files.
We have not yet verified any programs for Mac that work with this specific file format. If you know one, please use the 'Suggest a program' link below. We have not yet verified any web services that work with this specific file format. Suggest a program. Pulse Signature - Ambassador. See the R code snippet under the --distance documentation for an example of how to load the binary form.
If a table report was requested instead, the file contains a header line, followed by one line per filtered variant pair with the following fields:. A text file with no header line, and one section per set. A section has one line for each variant in the set, starting with the following two fields:. Note that sets containing no significant variants are not present in this report; this is a change from PLINK 1. Use "--set-p 1" if this is a problem. Produced by "--recode lgen" and "--recode lgen-ref".
Accompanied by a. Loaded with --lfile. A text file with no header line, and one line per genotype call or just not-homozygous-major calls if 'lgen-ref' was invoked usually with the following five fields:. There are several variations which are also handled by PLINK; see the original discussion for details. Produced by " --recode list ". A text file with no header line, and four lines per variant. Each line starts with the following three fields:. This is followed by two additional fields FID, then IID for each sample with the specified genotype call at the variant.
Variant information file accompanying a. Also generated by " --recode rlist ". Produced by " --distance 1-ibs " and --distance-matrix. A text file that is space-delimited if produced with --distance-matrix and tab-delimited otherwise.
Shape and contents are identical to that of. Each subsection contains one line per family member with the following three columns:. Finally, the. Produced by " --distance ibs " and --ibs-matrix. Possible shapes are the same as for.
Each identity-by-state value is just equal to one minus the corresponding. A text file with a header line, and then one line per nondegenerate variant with the following 5 fields:. Each section contains one line per considered flanking haplotype, followed by a 'HETERO' line covering flanking heterozygosity just one flanking call needs to be heterozygous , with the following 9 fields:. A text file with a header line, and then typically one line per variant with the following four fields:.
Original standard text format for sample pedigree information and genotype calls. Normally must be accompanied by a. Loaded with --file , and produced by --recode. The first six fields are the same as those in a. The seventh and eighth fields are allele calls for the first variant in the. This does not require the use of an additional loading flag. You can produce such a file with " --recode compound-genotypes ". It is also possible to load.
Produced by --make-perm-pheno. Valid input for --pheno. Missing phenotypes are always represented by the --[output-]missing-phenotype value this is a very minor change from PLINK 1. Produced by --meta-analysis , when at least one variant is rejected. Subsections are separated by two blank lines. Produced by "--recode A" and "--recode AD" , for use with R. The first six fields are:. If 'include-alt' was specified, the header line also names alternate allele codes in parentheses, e.
It starts with two short header lines: N on its own line where N is the number of samples , followed by number of variants on its own line. With "--recode fastphase", one file is generated per chromosome, and the full file extensions are of the form.
The third header line starts with 'P', and is followed by the base-pair coordinates of all variants. The second and third lines each have a single M -character string, with one character per allele call. Missing calls are coded as '? Produced by " --recode structure ", for use by Structure. A text file with two header lines: the first header line lists all V variant IDs, while each entry in the second line is the difference between the current variant's base-pair coordinate and the previous variant's bp coordinate or -1 when the current variant starts a new chromosome.
Reference allele file which accompanies a. A text file with no header line, and one line per polymorphic variant with the following fields:. Contents are identical to that of a. Possible shapes are essentially the same as for. Produced by " --recode rlist ". Accompanied by. A text file with no header line, and lines per variant. Each line starts with the following four fields:.
If there are no such samples, the entire line is omitted from the file. As a result, any variants with nothing but homozygous major genotypes are not mentioned at all. Produced by --write-set , and loaded with --set. A text file with a sequence of variant set definitions. Spaces, tabs, and newlines are acceptable and equivalent token delimiters; the files emitted by --write-set have a single token per line and a blank line between sets, but you can e.
When multiple set definitions share the same set ID, that currently results in an error rather than a merge.
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